msa(1)(編輯修改稿)
2025-03-01 01:31 本頁面
【文章內(nèi)容簡介】 6:, gi|132403|sp|P18902|RETB_BOVIN:)。 Fig. Page 325 five closely related lipocalins FengDoolittle stage 3: progressive alignment ? 根據(jù)導向樹中的位置關系建立多重比對 ? 先選擇距離最近的一個兩兩比對， ? 接著在此基礎上加入下一個 最近序列形成三重比對或加入下一個最近的兩兩比對 ? 重復此過程直到用完所有序列 ? 規(guī)則 : “一旦是空白 , 永遠 是空白 .” Page 324 Progressive MSA stage 3 of 3: progressively align the sequences following the branch order of the tree Fig. Page 324 Progressive MSA stage 3 of 3: CLUSTALX output Note that you can download CLUSTALX locally, rather than using a webbased program! Clustal W alignment of 5 closely related lipocalins CLUSTAL W () multiple sequence alignment gi|89271|pir||A39486 MEWVWALVLLAALGSAQAERDCRVSSFRVKENFDKARFSGTWYAMAKKDP 50 gi|132403|sp|P18902|RETB_BOVIN ERDCRVSSFRVKENFDKARFAGTWYAMAKKDP 32 gi|5803139|ref|| MKWVWALLLLAAWAAAERDCRVSSFRVKENFDKARFSGTWYAMAKKDP 48 gi|6174963|sp|Q00724|RETB_MOUS MEWVWALVLLAALGGGSAERDCRVSSFRVKENFDKARFSGLWYAIAKKDP 50 gi|132407|sp|P04916|RETB_RAT MEWVWALVLLAALGGGSAERDCRVSSFRVKENFDKARFSGLWYAIAKKDP 50 ********************:* ***:***** gi|89271|pir||A39486 EGLFLQDNIVAEFSVDENGHMSATAKGRVRLLNNWDVCADMVGTFTDTED 100 gi|132403|sp|P18902|RETB_BOVIN EGLFLQDNIVAEFSVDENGHMSATAKGRVRLLNNWDVCADMVGTFTDTED 82 gi|5803139|ref|| EGLFLQDNIVAEFSVDETGQMSATAKGRVRLLNNWDVCADMVGTFTDTED 98 gi|6174963|sp|Q00724|RETB_MOUS EGLFLQDNIIAEFSVDEKGHMSATAKGRVRLLSNWEVCADMVGTFTDTED 100 gi|132407|sp|P04916|RETB_RAT EGLFLQDNIIAEFSVDEKGHMSATAKGRVRLLSNWEVCADMVGTFTDTED 100 *********:*******.*:************.**:************** gi|89271|pir||A39486 PAKFKMKYWGVASFLQKGNDDHWIIDTDYD
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